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CheckCIF-PLAT900-910

2020-05-18 17:03 作者:DJ_Tokyo  | 我要投稿

plaT900 Type_1 Test for 'No-matching reflection file'

Likely cause: Dataset names in the CIF and FCF differ.

Note: FCF Validation is Skipped for this Entry.

(http://journals.iucr.org/services/cif/checking/plaT900.html)

警告原因:無衍射文件。

解決策略:用SHELXL 2014及以上版本精修即可。

plaT901 Type_1 Test for CIF & FCF CELL Not Matching

Possible causes: wrong dataset, CIF or FCF parameters edited inconsistently or cell parameters for transformed cell (e.g. P21/n <-> P21/c).

Note: FCF Validation is Skipped for this Entry.

(http://journals.iucr.org/services/cif/checking/plaT901.html)

警告原因:CIF和FCF中晶胞不匹配。

解決策略:一般不會出現(xiàn),有合理解釋即可。

plaT902 Type_1 Test for non-zero number of recognised reflections in FCF

Either no reflections are found in the FCF or the FCF is uninterpretable due to unknown format or editing.

Note: FCF Validation is Skipped for this Entry.

(http://journals.iucr.org/services/cif/checking/plaT902.html)

例:plaT902_ALERT_1_A No (Interpretable) Reflections found in FCF .... Please Check

警告原因:FCF中未發(fā)現(xiàn)可解釋的衍射點(diǎn)。

解決策略:一般不會出現(xiàn),有合理解釋即可。

plaT903 Type_1 Test for Fobs=Fcalc in FCF

Check the FCF file for F(obs) equal F(calc) [of F(obs)**2 equal F(calc)**2].

(http://journals.iucr.org/services/cif/checking/plaT903.html)

警告原因:FCF中Fobs=Fcalc。

解決策略:一般不會出現(xiàn),有合理解釋即可。

plaT904 Type_1 Test for NREF .GT. NPAR in the CIF

The number of reflections found in the reflection file is less than the number of parameters reported in the CIF.

(http://journals.iucr.org/services/cif/checking/plaT904.html)

警告原因:衍射文件(hkl文件)中衍射點(diǎn)數(shù)目少于CIF中報(bào)告的參數(shù)數(shù)目。

解決策略:一般不會出現(xiàn),有合理解釋即可。

plaT905 Type_3 Report Negative K values in the Analysis of Variance

Scale Factors (i.e. K = Mean[Fo**2] / Mean [Fc**2]) for selected groups of reflections, as listed in the Analysis of Variance Section #7 of the FCF validation report, are expected to have a value of about 1.000. Strong deviations should be investigated, acted upon or explained. (see also SHELXL manual). A reason can be meaningless (weak) high order data where a cut-back of the resolution might be indicated. Incorrect background treatment can lead to numerous negative observed intensities for weak reflections (i.e. F(calc) close to zero. For details see the Analysis-of-Variance Section in the '.ckf' file.

(http://journals.iucr.org/services/cif/checking/plaT905.html)

例:plaT905_ALERT_3_C Negative K value in the Analysis of Variance ...

警告原因:K值(標(biāo)度因子,K = Mean[Fo**2] / Mean [Fc**2])為負(fù)。

解決策略:使用Shel 999 0.84刪除高角度的點(diǎn),如無法解決有合理解釋即可。

plaT906 Type_3 Report Large K values in the Analysis of Variance

Scale Factors (i.e. K = Mean[Fo**2] / Mean [Fc**2]) for selected groups of reflections, as listed in the Analysis of Variance Section #7 of the FCF validation report, are expected to have a value of about 1.000. Strong deviations should be investigated, acted upon or explained. (see also SHELX manual). For details see the Analysis-of-Variance Section in the '.ckf' file.

(http://journals.iucr.org/services/cif/checking/plaT906.html)

例:plaT906_ALERT_3_C Large K value in the Analysis of Variance ...... 12.734 Check

警告原因:K值(標(biāo)度因子,K = Mean[Fo**2] / Mean [Fc**2])偏差較大。

解決策略:使用Shel 999 0.84刪除高角度的點(diǎn),如無法解決有合理解釋即可。

plaT907 Type_2 Check whether the structure needs to be inverted

A Flack x value generally indicates that the structure needs to be inverted. Check whether the Flack x value is unreliable due to weak anomalous dispersion signal, systematic errors or weak data and against know absolute structure.

(http://journals.iucr.org/services/cif/checking/plaT907.html)

例:plaT907_ ALERT_2_C Flack x > 0.5, structure needs to be inverted? . 1.02 check

警告原因:Flack系數(shù)x大于0.5。

解決策略:對結(jié)構(gòu)進(jìn)行翻轉(zhuǎn)即可。(Olex2中可通過鍵入inv -f指令實(shí)現(xiàn)構(gòu)型翻轉(zhuǎn))

plaT908 Type_2 Report on Max Observed data in any Resolution Shell

A low maximum percentage of reflections with I > 2*s(I) may indicate:

1 - Missed translation symmetry. E.g. all reflections hkl weak for l = 2n +1?

2 - Pseudo-merohedral twinning, index > 1. (e.g. non-spacegroup extinctions).

3 - Very weak observed data.

(http://journals.iucr.org/services/cif/checking/plaT908.html)

警告原因:衍射強(qiáng)度低,晶體小或者衍射能力弱。

解決策略:無需解決,有合理解釋即可。

plaT909 Type_3 Report of Observed data at Theta Cutoff

This ALERT Reports on whether there is still a significant level of observed data beyond the Theta cutoff of the Dataset. There should be a good reason for a cutoff below sin(theta)/lambda = 0.6.

(http://journals.iucr.org/services/cif/checking/plaT909.html)

例:plaT909_ALERT_3_G Percentage of Observed Data at Theta(Max) still 53 %

警告原因:可觀測衍射點(diǎn)比例在高角度仍然較高。衍射強(qiáng)度低,晶體小或者衍射能力弱。

解決策略:無需解決,有合理解釋即可。

plaT910 Type_3 Test for missing reflections below Theta(Min)

Possible causes: Beamstop Theta(min) limit set too high, large unit-cell etc. A possible technical solution on CCD based equipment involves the collection of additional images with the detector at a larger distance from the crystal with the beamstop setting changed accordingly.

Alternatively, a large number of low-order reflections might have been 'Omitted' from the (final) least-squares refinement.

(http://journals.iucr.org/services/cif/checking/plaT910.html)

例:plaT910_ALERT_3_B Missing # of FCF Reflection(s) Below Theta(Min). 11 Note

警告原因:缺少部分衍射點(diǎn)。

解決策略:可不解決,有合理解釋即可。也可重新收集數(shù)據(jù)補(bǔ)齊缺失數(shù)據(jù)。


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