CheckCIF-HYDTR01
PROC-NAME: HYDTR01 Type_1
PURPOSE: Check that the value of _refine_ls_hydrogen_treatment is recognised.
CHECKLIST:
? ? ? ? refall (all H parameters refined)
? ? ? ? refxyz (only H coordinates refined)
? ? ? ? refU (only H U values refined)
? ? ? ? noref (no H parameters refined)
? ? ? ? undef (H parameters not determined)
? ? ? ? constr (H sites constrained by attached site)
? ? ? ? none
? ? ? ? mixed
Otherwise issue ALERT C
? ? ? ? ?"Alert C The hydrogen treatment doesn't match a standard keyword"
n.b. "see text" and "riding" have been allowed even though these do not comply with the current CIF-dictionary.
IF extra text is found in the field (i.e. over and above the keyword) issue a General ALERT
? ? ? ? ?"Extra text has been found in the _refine_ls_hydrogen_treatment field. Explanatory text should be in the _publ_section_refinement field."
? ? ? ? _refine_ls_hydrogen_treatment must ONLY be one of the following keywords (do not add extra text to this field):
? ? ? ? refall
? ? ? ? refxyz
? ? ? ? refU
? ? ? ? noref
? ? ? ? undef
? ? ? ? constr
? ? ? ? none
? ? ? ? mixed
? ? ? ? You cannot use multiple keywords to depict a variety of methods - use 'mixed' instead.
? ? ? ? For a riding refinement, use 'constr'.
? ? ? ? By default, SHELXL inserts 'mixed' in EVERY case. Please ensure that you edit this item to represent the actual H-atom treatment used.
? ? ? ? Additional descriptive text, if required, should be placed in the _publ_section_exptl_refinement section.
(http://journals.iucr.org/services/cif/checking/HYDTR_01.html)
目的:檢查_refine_ls_hydrogen_treatment值是否可識別。
檢查列表:
? ? ? ? refall (精修氫原子所有參數(shù))
? ? ? ? refxyz (僅精修氫原子坐標)
? ? ? ? refU (僅精修氫原子的U)
? ? ? ? noref (不精修氫原子參數(shù))
? ? ? ? undef (氫原子參數(shù)未確定)
? ? ? ? constr (氫原子位置由其母體原子位置所限制)
? ? ? ? none
? ? ? ? mixed
若非上述關鍵詞之一則發(fā)布C級警告
? ? ? ?? "Alert C The hydrogen treatment doesn't match a standard keyword"
n.b. "see text" and "riding" have been allowed even though these do not comply with the current CIF-dictionary.
若該字段出現(xiàn)額外文本(即超出上述關鍵詞范圍)則發(fā)布一般警告
? ? ? ? ?"Extra text has been found in the _refine_ls_hydrogen_treatment field. Explanatory text should be in the _publ_section_refinement field."
? ? ? ? _refine_ls_hydrogen_treatment必須僅為下列關鍵詞之一(切勿在該字段添加額外文本):
? ? ? ? refall
? ? ? ? refxyz
? ? ? ? refU
? ? ? ? noref
? ? ? ? undef
? ? ? ? constr
? ? ? ? none
? ? ? ? mixed
? ? ? ? 切勿使用多個關鍵詞來描述多種方法,使用“mixed”代替即可。
? ? ? ? 對于騎式精修,使用“constr”。
? ? ? ? SHELXL在每種情況下默認插入“mixed”。請確保編輯此條目以表示實際使用的氫原子處理方法。
? ? ? ? 如有需要,其他說明性文本應置于_publ_section_exptl_refinement部分。
警告原因:氫原子處理方法關鍵詞無法被CheckCIF識別。
解決策略:根據實際情況從上述八個關鍵詞中選其一填入CIF文件_refine_ls_hydrogen_treatment條目,如有其他情況需要說明,則填在_publ_section_exptl_refinement條目。